Digital library

  • The Farm Aquaculture Resource Management (FARM) model has been applied to several shellfish species and aquaculture types. The performance of the FARM model, developed to simulate potential harvest, key financial data, and water quality impacts at the farm-scale, was tested in five systems in the European Union: Loch Creran, Scotland (Pacific oyster), Pertuis Breton, France (blue mussel), Bay of Piran, Slovenia (Mediterranean mussel), Chioggia, Italy (Mediterranean mussel) and Ria Formosa, Portugal (Manila clam). These systems range from open coasts to estuaries, and are used for shellfish aquaculture by means of different cultivation techniques (e.g. oyster bottom culture in Loch Creran and mussel longlines and poles in Pertuis Breton). The drivers for the FARM model were supplied by measured data, outputs of system–scale models or a combination of both.

    The results (given in total fresh weight) generally show good agreement with reported annual production (shown in brackets) at each farm: simulated production of 134 t of Pacific oyster in Loch Creran (150 t, −10%), 2691 t of blue mussel in Pertuis Breton (2304 t, +17%), 314 t of Mediterranean mussel in the Bay of Piran (200 t, +57%), 545 t of Mediterranean mussel in Chioggia (660 t, −17%) and 119 t of Manila clam in Ria Formosa (104 t, +15%). The nitrogen mass balance for each farm was also determined with the FARM model. The net removal of nitrogen (N) by the farms was estimated to correspond to 1151 population equivalents per year (PEQ y−1) in Loch Creran, 39505 PEQ y−1 in Pertuis Breton, 210 PEQ y−1 in the Bay of Piran, 7108 PEQ y−1 in Chioggia and 8748 PEQ y−1 in Ria Formosa. The aggregate income due to both the shellfish sale and substitution value of land-based fertilizer reduction or nutrient treatment was estimated to be about 680 k€ y−1 in Loch Creran, 14930 k€ y−1 in Pertuis Breton, 220 k€ y−1 in the Bay of Piran, 2560 k€ y−1 in Chioggia, and 5040 k€ y−1 in Ria Formosa. Outputs of FARM may be used to analyse the farm production potential and profit maximization according to seeding densities and/or spatial distribution. Results of a marginal analysis for all the study sites were determined. As an example, profit maximization in Loch Creran was obtained with 97 t of seed, resulting in a total production of 440 t (profit of 2100 k€ for a culture period of about 2 years). FARM additionally integrates the well-known ASSETS model, for assessment of farm-related eutrophication impacts. The assessment results for the five study sites show that water quality is either maintained or improved in all farms under standard conditions of culture practice.

    FARM results may be used by farmers to analyse farm production potential and by managers for environmental assessment of farm-related water quality impacts, whether positive or negative. It is a useful tool for all stakeholders for the valuation of nitrogen credits, which may be traded as part of an integrated catchment management plan.

    Author(s): J.G. Ferreira, A. Sequeira, A.J.S. Hawkins, A. Newton, T.D. Nickell, R. Pastres, J. Forte, A. Bodoy, S.B. Bricker
  • Background: The catalytic mechanism and substrate recognition required for cleavage of the -linkage in agarose are unclear.
    Results: Structural analysis of a family 117 glycoside hydrolase details substrate recognition and supports an inverting mechanism. 

    Conclusion: GH117 enzymes use substrate distortion and an unusual general acid for catalysis.
    Significance: Microbes may utilize alternate strategies to catalyze the degradation of polysaccharides with unique structural characteristics

    Author(s): Jan-Hendrik Hehemann, Leo Smyth, Anuj Yadav, David J. Vocadlo, Alisdair B. Boraston
  • Membrane transporters play a central role in many cellular processes that rely on the movement of ions and organic molecules between the environment and the cell, and between cellular compartments. Transporters have been well characterized in plants and green algae, but little is known about transporters or their evolutionary histories in the red algae. Here we examined 482 expressed sequence tag contigs that encode putative membrane transporters in the economically important red seaweed Porphyra (Bangiophyceae, Rhodophyta). These contigs are part of a comprehensive transcriptome dataset from Porphyra umbilicalis and Porphyra purpurea. Using phylogenomics, we identified 30 trees that support the expected monophyly of red and green algae/plants (i.e. the Plantae hypothesis) and 19 expressed sequence tag contigs that show evidence of endosymbiotic/horizontal gene transfer involving stramenopiles. The majority (77%) of analyzed contigs encode transporters with unresolved phylogenies, demonstrating the difficulty in resolving the evolutionary history of genes. We observed molecular features of many sodium-coupled transport systems in marine algae, and the potential for coregulation of Porphyra transporter genes that are associated with fatty acid biosynthesis and intracellular lipid trafficking. Although both the tissue-specific and subcellular locations of the encoded proteins require further investigation, our study provides red algal gene candidates associated with transport functions and novel insights into the biology and evolution of these transporters.

    Author(s): Debashish Bhattacharya, Susan Brawley, Ira A. Levine, Senjie Lin, Anita S. Klein, Renee L. Eriksen, Gry Mine Berg, Christoph Benning, Yunyun Zhuang, Nicolas A Blouin, Simon E Prochnik, Arthur R Grossman, Glen Wheeler, Simone Zäuner, Cheong Xin Chan
  • This research was conducted in the seaweed industries in South Sulawesi, especially in theMakassar industrial area (KIMA). The purpose of this study is to develop a strategy for developingseaweed commodity processing industries to increase added value. Analysis of the data used is usingSWOT analysis. With SWOT analysis, it can produce several alternative strategies in making gooddecisions to be carried out. So that it can determine the development strategy of the seaweed industry. Theresults showed an IFAS score of 2.79 and a score for the EFAS results of 2.85. When converted into IEMatrix diagram, it is located in quadrant V, where the results of the company enter into the phase ofGrowth and Stability. The right strategy for companies in quadrant V is SO strategy, using a strategy thatutilizes existing opportunities by utilizing the strengths they possess, namely by intensification andextensification of cultivated land, diversification of seaweed processed products and development of fisheryproducts that have high added value including the biotechnology-based industry.

    Author(s): Aris Baso, S. Made, Reza
  • Marine bacteria contribute significantly towards the fouling consortium, both directly (modern foul release coatings fail to prevent “slime” attachment) and indirectly (biofilms often excrete chemical cues that attract macrofouling settlement). This study assessed the natural product anti-biofilm performance of an extract of the seaweed, Chondrus crispus, and two isolated compounds from terrestrial sources, (+)-usnic acid and juglone, against two marine biofilm forming bacteria, Cobetia marina and Marinobacter hydrocarbonoclasticus. Bioassays were developed using quantitative imaging and fluorescent labelling to test the natural products over a range of concentrations against initial bacterial attachment. All natural products affected bacterial attachment; however, juglone demonstrated the best anti-biofilm performance against both bacterial species at a concentration range between 5–20 ppm. In addition, for the first time, a dose-dependent inhibition (hormetic) response was observed for natural products against marine biofilm forming bacteria. 

    Author(s): Keith R. Stokes, Paul Stoodley, Simon P. Dennington, Julian A. Wharton, Maria Salta
  • Herpes simplex virus (HSV) is the causative agent of a fever blister, genital herpes and neonatal herpes. Treatment of HSV infection was performed by acyclovir. Acyclovir remains to have a side effect in the case of long-term usage, and the virus may develop drug resistance. Therefore, these problems are interesting to study the natural substance for the treatment of HSV infection and drug-resistant HSV infection. In the present, edible algae are supplied as a healthy food because algae contain high nutrition and have many active compounds that are beneficial to health. Therefore, the algal extract can be used as an alternative agent for the treatment of HSV infection. The purpose of this research was to investigate the inhibitory effect of the algal polysaccharide extracts from Ulva reticulata against herpes simplex virus type 1 and type 2 infection in Vero cell. The structure of polysaccharide was analyzed by FT-IR technique. The algal polysaccharide extract from U. reticulata represents S=O and C–O–S of sulfate group. Besides, the toxicity of algal polysaccharide extract on Vero cell was evaluated by MTT assay. The algal polysaccharide extract from U. reticulata showed low toxicity on the cells with 50% cytotoxic concentration was greater than 5000 μg/mL. Inhibition of HSV infection was determined on Vero cell using plaque reduction assay. The results indicated that the algal polysaccharide extracts from U. reticulata showed antiviral activity against HSV-1 upon treatment before, meanwhile and after viral adsorption with 50% effective concentration of 2,525.90, 58.32 and 263.95 μg/mL, respectively. Also, the algal polysaccharide extracts from U. reticulata showed antiviral activity against HSV-2 upon treatment before, meanwhile and after viral adsorption with EC50 of 163.26, 9.70 and 527.28 μg/mL, respectively. Besides, HSV-1 and HSV-2 viral particles were inactivated by the polysaccharide extract from U. reticulata. In summary, the polysaccharide extract from U. reticulata could protect Vero cell from HSV infection, inhibit HSV infection and inactivate HSV particles. Therefore, it will be useful to apply U. reticulata polysaccharide extract as a potential anti-HSV agent. 

    Author(s): Pitchayuth Srisai , Jeeraporn Pekkoh, Yingmanee Tragoolpua
  • A monoacylglycerol (1) and a 1:1 mixture of two monogalactosyl diacylglycerols (MGDGs) (2 and 3) were isolated from the brown seaweed Fucus spiralis Linnaeus. The structures were elucidated by spectroscopic means (NMR and MS) and by comparison with the literature. Compound 1 was composed of a glycerol moiety linked to oleic acid (C18:1 Ω9). Compounds 2 and 3 contained a glycerol moiety linked to a galactose unit and eicosapentaenoic acid (C20:5 Ω3) combined with octadecatetraenoic acid (C18:4 Ω3) or linolenic acid (C18:3 Ω3), respectively. The isolated compounds were tested for their cytotoxic and anti-inflammatory activity in RAW 264.7 macrophage cells. All of them inhibited NO production at non-cytotoxic concentrations. The fraction consisting of compounds 2 and 3, in a ratio of 1:1, was slightly more effective than compound 1 (IC50 of 60.06 and 65.70 µg/mL, respectively). To our knowledge, this is the first report of these compounds from F. spiralis and on their anti-inflammatory capacity.

    Author(s): Patrícia Valentã, Paula B. Andrade, Peter Proksch, Georgios Daletos, Graciliana Lopes
  • Ecklonia cava is popular in Korea as a marine functional materials. E. cava is generally collected and used on the coast of Jeju Island. However, the continuous use of collected natural E. cava may be limited because difficult to secure throughout the year and may be exposed to environmental pollution. Jeju magma seawater (MSW) was known to be significant advantages such as safety, cleanness, stability, and functional improvement. Attempts have been reported on application of MSW to the culturing of macro- and microalgae and showed improved results. Thus, the objective of the present study was to explore the anti-melanogenesis activity of brown seaweed E. cava (E. cava cultured with MSW [MSWE]) extract cultured in tanks with MSW of Jeju Island to evaluate the possibility of cosmeceutical industrial application. MSWE extract showed the higher polyphenolic and dieckol contents than natural E. cava (NE) extract. Anti-melanogenesis activity of MSWE extract and NE extract are tested and compared using tyrosinase and dihydroxy-phenylalanine (DOPA) oxidation inhibition assay. MSWE extracts evidenced more effective tyrosinase and DOPA oxidation inhibition activity than that of the NE extracts and the commercial whitening agent, arbutin. MSWE extracts also markedly inhibited melanin synthesis and decreased the expression of melanogenesis-related protein in α-melanocytestimulating hormone-stimulated B16F10 melanoma cells without cytotoxicity. These results suggest that MSW cultivation process would be more effective in releasing bioactive compounds with whitening effect from seaweed such as E. cava at an industrial scale.

    Author(s): Yuling Ding, So Hui Kim, Jeong Jun Lee, Jin Tae Hong, Eun-A Kim, Do-Hyung Kang , Soo-Jin Heo, Seung-Hong Lee
  • BACKGROUND/OBJECTIVES: Abundant consumption of seaweeds in the diet is epidemiologically linked to the reduction in risk of developing cancer. In larger cases, however, identification of particular seaweeds that are accountable for these effects is still lacking, hindering the recognition of competent dietary-based chemo preventive approaches. The aim of this research was to establish the antiproliferative potency and angiosuppressive mode of action of Stoechospermum marginatum seaweed methanolic extract using various experimental models. 

    MATERIALS/METHODS: Among the 15 seaweeds screened for antiproliferative activity against Ehrlich ascites tumor (EAT) cell line, Stoechospermum marginatum extract (SME) was found to be the most promising. Therefore, it was further investigated for its anti-proliferative activity in-vitro against choriocarcinoma (BeWo) and non-transformed Human embryonic kidney (HEK 293) cells, and for its anti-migratory/tube formation activity against HUVEC cells in-vitro. Subsequently, the angiosuppressive activity of S. marginatum was established by inhibition of angiogenesis in in-vivo (peritoneal angiogenesis and chorioallantoic membrane assay) and ex-vivo (rat cornea assay) models.

    RESULTS: Most brown seaweed extracts inhibited the proliferation of EAT cells, while green and red seaweed extracts were much less effective. According to the results, SME selectively inhibited proliferation of BeWo cells in-vitro in a dose-dependent manner, but had a lesser effect on HEK 293 cells. SME also suppressed the migration and tube formation of HUVEC cells in-vitro. In addition, SME was able to suppress VEGF-induced angiogenesis in the chorio allantoic membrane, rat cornea, and tumor induced angiogenesis in the peritoneum of EAT bearing mice. A decrease in the microvessel density count and CD31 antigen staining of treated mice peritoneum provided further evidence of its angiosuppressive activity.

    CONCLUSIONS: Altogether, the data underline that VEGF mediated angiogenesis is the target for the angiosuppressive action of SME and could potentially be useful in cancer prevention or treatment involving stimulated angiogenesis.
    Author(s): Bharati Salimath, Anil Chatterji, Shilpa Puttananjaiah, Rashmi Vinayak
  • The potential antiangiogenic and antitumoral properties of SargA, a polysaccharide extracted from the brown marine alga Sargassum stenophyllum, were studied in assays carried out in chick embryos and mice. Gelfoam plugs containing SargA (2–1500 lg/ plug) implanted in vivo into fertilized 6-day-old chicken eggs induced dose-related antiangiogenic activity in the chorioallantoic membrane (CAM). By day 8, the highest dose of SargA alone decreased the vessel number in the CAM by 64%, but coadminis

    Author(s): Paulo Fernando Dias , Jarbas Mota Siqueira Jr Luiz Felipe Vendruscolo, Teresinha de Jesus Neiva Antonio Ricardo Gagliardi, Marcelo Maraschin Rosa Maria Ribeiro-do-Valle

Pages